Downloads a complete data set from mockrobiota.

mockrobiota(name, folder, quiet = !interactive())

Arguments

name

Name of the mockrobiota data set.

folder

Where to save the data.

quiet

Whether to show download progress.

Value

A list with the following components

description

A description of the data set.

forward

Filepath to the forward reads.

reverse

Filepath to the reverse reads.

index

Filepath to the index file.

citation

Reference for the data set.

fragment

Which fragment(s) were sequenced.

equipment

The used sequencing equipment.

samples

A data frame mapping samples to barcodes.

ps_gg

The reference phyloseq object using the green genes taxonomy.

ps_silva

The reference phyloseq object using the silva taxonomy.

Examples

NULL
#> NULL