Calculate the effective transcript lengths. This is the mean number of positions in the transcript the fragment could map to.

Source: R/RcppExports.R

Calculate the effective transcript lengths. This is the mean number of positions in the transcript the fragment could map to.

effective_lengths(txlengths, rdlengths)

Arguments

txlengths

The sequence lengths for each transcript.
rdlengths

The length of all mapped fragments. Mapped length of the read after accounting for mismatches and indels.

Value

The effective lengths.